Insertion junction: CLIP2.062363_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062363
Chromosome:chromosome 3
Location:1293614
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150151 NRT2E Nitrate/nitrite transporter; (1 of 5) PTHR23515:SF2 - HIGH AFFINITY NITRATE TRANSPORTER 2.3-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTGAATCTGTGAACGATGATGGATTGTGATAATGCTCTAGCTGTAACA
Internal bar code:TTATGGGTCTCCTGATCCCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1481
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACACACACCTGT
Suggested primer 2:CTCACCCCTGCTCCAGAAAG