Insertion junction: CLIP2.062369_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062369
Chromosome:chromosome 13
Location:640486
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g565900 (1 of 2) PF10513 - Enhancer of polycomb-like (EPL1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGAGCTCCAGAGCTATCCGGCCTCGGCCGCTGAATTATAATGAGCGGC
Internal bar code:CGGGAGGATGTCCTAAAACGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:138
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCATGTCGTACTGCACCA
Suggested primer 2:AGTACAACGTCGCTCAAGCA