Insertion junction: CLIP2.062379_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062379
Chromosome:chromosome 14
Location:2685375
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g625750 TIC22 Putative chloroplast envelope protein; (1 of 1) PTHR33926:SF2 - PROTEIN TIC 22, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAGAATTTGAGAGTGTGCTGCTCCGGCGGCGGCCGCCCAGCGGTGTGC
Internal bar code:AGAAGCTGCTGTCTGTCTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1477
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGGAAGATGTGGGGGAGG
Suggested primer 2:GTCGCGTAGATTGCAACCAC