Insertion junction: CLIP2.062380_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062380
Chromosome:chromosome 16
Location:4709473
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g667100 LMR3 (1 of 1) PTHR20932//PTHR20932:SF9 - LOC443603 PROTEIN-RELATED // SUBFAMILY NOT NAMED; Predicted protein with LysM domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGATGCTTTACCCCTTTACTTCCACGTTGTGGCGCGTGTGCGTGTCTGT
Internal bar code:GGGGTGGGAGCGGGACAATGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4110
LEAP-Seq percent confirming:91.25
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCCTCAAGCACGCTTAA
Suggested primer 2:CTGCTGCAGTTCGTTCACAC