Insertion junction: CLIP2.062381_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062381
Chromosome:chromosome 8
Location:2623256
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g373250 POA2 20S proteasome alpha subunit B; (1 of 1) K02726 - 20S proteasome subunit alpha 2 (PSMA2) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCTGCGACGGTGCCCGGTGCCCCAGGCGCGAACGCCCACGAGCGGGA
Internal bar code:TAATTGCTCTCTACGTGGAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:292
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCTTGAAAACCTTTCGCA
Suggested primer 2:TGTACACCACACCGATCTGC