Insertion junction: CLIP2.062383_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062383
Chromosome:chromosome 10
Location:2837090
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g439100 CCT1 T-complex protein 1, alpha subunit; (1 of 1) K09493 - T-complex protein 1 subunit alpha (CCT1, TCP1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGCTTACATCACACAACACCTGACCTGCGCGCCAGACAGAGATCCAT
Internal bar code:CGCGATACAGCTGTCAGCGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3366
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:117
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:117

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGATCGTCCCATGTCCCT
Suggested primer 2:AACCTTTTGAATGGCACGCC