Insertion junction: CLIP2.062383_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062383
Chromosome:chromosome 10
Location:2837090
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g439100 CCT1 T-complex protein 1, alpha subunit; (1 of 1) K09493 - T-complex protein 1 subunit alpha (CCT1, TCP1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCAATATGCAAGGTCGAGCGTATTGGCAGAGGCATTGGTATTGGCAGA
Internal bar code:CGCGATACAGCTGTCAGCGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2280
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:AACCTTTTGAATGGCACGCC
Suggested primer 2:TGAGATCGTCCCATGTCCCT