Insertion junction: CLIP2.062385_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062385
Chromosome:chromosome 8
Location:2140173
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g369720 (1 of 18) 3.6.3.44 - Xenobiotic-transporting ATPase / Steroid-transporting ATPase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGAGGGCTGCTACTATTGAGTTATGCCCATGCGGAGGATTGCTCGAGA
Internal bar code:TGTTTTACGTGTCTGAGCAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2008
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGCGGCAAGATTAATGG
Suggested primer 2:CAGCAGCTCTGATCTCTCGG