Insertion junction: CLIP2.062394_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062394
Chromosome:chromosome 2
Location:399380
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g075750 (1 of 13) PF00646 - F-box domain (F-box) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGTAGCCCTCCGGCCGCCCGCTTCAGTCGTTGATGCCGTGCACACTC
Internal bar code:CCTGGAGCGTCTACAGAAGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2021
LEAP-Seq percent confirming:91.1765
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TGACCGTTCGTCTGGACTTG
Suggested primer 2:TGCACTGTCAACCCTGGTTT