Insertion junction: CLIP2.062397_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062397
Chromosome:chromosome 11
Location:3175339
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g475900 (1 of 2) PTHR12121//PTHR12121:SF34 - CARBON CATABOLITE REPRESSOR PROTEIN 4 // LD39302P 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGCGCCGTGGTGGTGCTGCCGCCTGCGGGCGGCGGCGCACGAAGTTG
Internal bar code:TCGACCTGGGTGGGACTTGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1512
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCTCTGCTCTGAGTCCT
Suggested primer 2:GGCACGCTGGACTACATCTT