Insertion junction: CLIP2.062400_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.062400
Chromosome:chromosome 2
Location:816410
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078700 (1 of 1) PTHR10694//PTHR10694:SF7 - JUMONJI DOMAIN CONTAINING PROTEIN // LYSINE-SPECIFIC DEMETHYLASE 4A-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGATTTTTGGCCTGGACTGGCACGGTTAAATACCGCATAAATCATGCTA
Internal bar code:CCACTACAATGGCTCTTCTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1605
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCTCAACATACTGCGCG
Suggested primer 2:TCTGGTCAAAAGACTGCGCT