Insertion junction: CLIP2.062411_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062411
Chromosome:chromosome 12
Location:6237178
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g536150 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGCGGGTGGTGGCGCCATGGTGGCGGCGGCCTCCTGTACACTCTGCA
Internal bar code:TGCGTTTTCGTTATAATGATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5149
LEAP-Seq percent confirming:97.8022
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGAAGGGTTTGCTGCAAC
Suggested primer 2:GGCAGCCACCTCCTTGTTAT