Insertion junction: CLIP2.062415_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062415
Chromosome:chromosome 16
Location:6576608
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674100 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGCAAGAGGAGAACACAGAGGCACGAACGCGAAACGGCATTTGTAC
Internal bar code:GTCCATGGTGGGGGGGCCTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:990
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTGCGTGCTCAGTTTCGG
Suggested primer 2:CTCGCATCTCCCAATCCCTC