Insertion junction: CLIP2.062417_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062417
Chromosome:chromosome 6
Location:1182640
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258250 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCGGCCGGCCGCCCGTTCTTCGTACACTCGCTGGGACAACACGCACAG
Internal bar code:TACGGCAATCGTTTTATAGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1256
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTTCGTGGAGTTCAGGCA
Suggested primer 2:ATGCTGTGAGTCAGTGCGAA