Insertion junction: CLIP2.062422_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062422
Chromosome:chromosome 12
Location:8306360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g551100 (1 of 1) PTHR36356:SF1 - EXPRESSED PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCAGCAGGACGGGCCTGTGATTGATGCGGAGTGGACGTCGCTGGATG
Internal bar code:CTTTTTGTGCGGAGCAGTCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3385
LEAP-Seq percent confirming:3.63636
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:53
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTGCACACTCTACACCA
Suggested primer 2:ACGGTAGTGGATCCCATGGA