Insertion junction: CLIP2.062423_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062423
Chromosome:chromosome 12
Location:6544317
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g538150 (1 of 1) K05019 - chloride channel, nucleotide-sensitive, 1A (CLNS1A) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCGCCCCAGCGGTACCGCCCGGATGCTACCGCCCATTGCTGGCCGGCT
Internal bar code:GCACATAGATGTCGCTGCCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:233
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGTGGACGACATGTTCA
Suggested primer 2:TCCCGTCTTGGAGGTCTCAT