Insertion junction: CLIP2.062426_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062426
Chromosome:chromosome 17
Location:917101
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g702750 SDR27 (1 of 1) 1.1.1.102 - 3-dehydrosphinganine reductase / KTS reductase; Short-chain dehydrogenase/reductase 5'UTR
Cre17.g702800 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTATGCTTATCAAAGAGCTAGGTGGCCGATTTGCGCTCTCATCAACGCT
Internal bar code:GATTTTGGTTGAGTGCCTCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:928
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CACAAAGAAGGATCGGGGCT
Suggested primer 2:GGTAACCAAGTGCCGTCAGA