Insertion junction: CLIP2.062429_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062429
Chromosome:chromosome 14
Location:484564
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g611000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGGGGGCTTGGGGGCTTAAGTGTAGATGCCGCGGTCAGGGTCATCTA
Internal bar code:ATAGTAACGATGGCGTAGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1391
LEAP-Seq percent confirming:90.3226
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGGGAACGTGACAAGGC
Suggested primer 2:CTGTGTGTGCAAGTCACTGC