Insertion junction: CLIP2.062430_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062430
Chromosome:chromosome 12
Location:3595329
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g512950 CIT1 (1 of 1) K07240 - chromate transporter (chrA); Chromate ion transporter 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACGAAAATCCTAACGCGTACGGAATTCCAACCGGAACCGTCGCCGGCC
Internal bar code:ACCCCTGCGGGGCAAGTAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:983
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAAGGATAGCACCGTCCG
Suggested primer 2:GACCTCCGAAGCCGATGTAG