Insertion junction: CLIP2.062432_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062432
Chromosome:chromosome 16
Location:5311984
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683850 GDPD1,GDP1 Glycerophosphoryl diester phosphodiesterase family protein; (1 of 5) PTHR23344//PTHR23344:SF7 - GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE // GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAACACGTGCGTCTAGCACTTGGGGTTGTGCGGCTTGGGGCGGCCGGC
Internal bar code:CTCTATATTAGAAGATTGCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3000
LEAP-Seq percent confirming:22.093
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:67
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGTACGCACGCACTGAC
Suggested primer 2:GATGTCAGTGCAGCAACACG