Insertion junction: CLIP2.062438_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062438
Chromosome:chromosome 7
Location:2748195
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g331300 AGP3 ADP-glucose pyrophosphorylase large subunit; (1 of 1) PF00132//PF00483 - Bacterial transferase hexapeptide (six repeats) (Hexapep) // Nucleotidyl transferase (NTP_transferase) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATTATGGAAGTGAAGGCGTAGGGGATGTGTGGGGCGCGGCACTAGCGT
Internal bar code:GTTCAAGTTGTCACGAACGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:625
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGTCCGTCCTCTTCCCC
Suggested primer 2:CGTGGCTGTGGAATTGTGTG