Insertion junction: CLIP2.062445_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062445
Chromosome:chromosome 16
Location:2775998
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g662300 SMP8 U6 snRNA-associated Sm-like small nuclear riboprotein LSm3; (1 of 1) K12622 - U6 snRNA-associated Sm-like protein LSm3 (LSM3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAAACACTCCAGCCCACACCCGCTCCCAAGCACAGTGTGTCTGCCTGC
Internal bar code:TCTTCGGGGTATTTACTGGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1345
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGTTACGTGCGTGTGTG
Suggested primer 2:GTCGTGCGTAAATGCGACTC