Insertion junction: CLIP2.062447_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062447
Chromosome:chromosome 3
Location:1627925
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152650 (1 of 39) IPR009003 - Peptidase S1, PA clan 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTCCATGCAATGCCAAGCGCCGTGCGTCATTGGTCCATGGCGGCCGAC
Internal bar code:GATCGCTTGACTTAATACCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:5391
LEAP-Seq percent confirming:81.8966
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:116

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCGCAAGTTATGTCTGC
Suggested primer 2:TGCCATTTTGCCGTTACGTG