Insertion junction: CLIP2.062450_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062450
Chromosome:chromosome 1
Location:8180427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g069837 (1 of 12) IPR000595//IPR018490 - Cyclic nucleotide-binding domain // Cyclic nucleotide-binding-like 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGTATCTGTTGCCAGCCACTACCACTATCGAAGTGCTGTTTGTTGCTC
Internal bar code:ACCCAGCGAGCGGAAGGGCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3540
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGGCGAACCCATCCCAAT
Suggested primer 2:GCAACCAAGTCAACGCACAT