Insertion junction: CLIP2.062455_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.062455
Chromosome:chromosome 4
Location:2395982
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g221301 CYCD5 D-type cyclin; (1 of 10) PTHR10177 - CYCLINE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTAGAAGTTCTGGCTGTGAGACAGCAGCCGGGTCCCGTAGGCGTGCA
Internal bar code:GTATACCGCGGTAGTTTATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1793
LEAP-Seq percent confirming:87.8788
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CAACTTAGCCCATGAGCCCA
Suggested primer 2:TTGCTTCTGGTATGCCACGT