Insertion junction: CLIP2.062458_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062458
Chromosome:chromosome 2
Location:1296212
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g082450 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGATGCCAAGCGATTAGCATGCGCGTGGAGTTTGTAGGCGTGGAGTTTG
Internal bar code:CGCTAATGGGGTTCGGGTTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2431
LEAP-Seq percent confirming:95.1219
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TAAAGGCAGCCACCTCCTTG
Suggested primer 2:TGACACACACACAGAGTCCG