Insertion junction: CLIP2.062460_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062460
Chromosome:chromosome 12
Location:3757877
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514300 (1 of 5) 2.3.1.24 - Sphingosine N-acyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACTAAATGCCGGCCAGCATCCGCCCTTCTTCGTCATCACGCTACCCA
Internal bar code:CGATGGTCACCTCGTACTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3140
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGAGTGCTCGTGAGGTT
Suggested primer 2:AGGTGAGTGGTGCCTTAAGC