Insertion junction: CLIP2.062460_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062460
Chromosome:chromosome 12
Location:3757877
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514300 (1 of 5) 2.3.1.24 - Sphingosine N-acyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATGGCAGGCTAGGACATTCAATTATGACCGGACGTGCTTGCGTGGCCC
Internal bar code:CGATGGTCACCTCGTACTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1635
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGAGTGGTGCCTTAAGC
Suggested primer 2:CTGTGAGTGCTCGTGAGGTT