Insertion junction: CLIP2.062461_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062461
Chromosome:chromosome 2
Location:5235861
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112333 (1 of 19) K08850 - aurora kinase, other [EC:2.7.11.1] (AURKX) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGATGCCTATTCTTTTTACAGTGTCGATTGCGTATCCTGCATACACTG
Internal bar code:ATGTTACCGTACGTCACAACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2804
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GACTCCGTTACCGAGCGAAT
Suggested primer 2:TGCTGGATAACGGAGGAGGA