Insertion junction: CLIP2.062465_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062465
Chromosome:chromosome 2
Location:8298643
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g143250 IDH2 (1 of 2) 1.1.1.41 - Isocitrate dehydrogenase (NAD(+)) / Nicotinamide adenine dinucleotide isocitrate dehydrogenase; Isocitrate dehydrogenase, NAD-dependent 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGTGTTTGGGTTTTCCCGAGTGCACAATCGCGTGCCCCATGCGGTCG
Internal bar code:TCCGTAGTGACAGGTAGCTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1487
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCAAATCCGATCTAGCGA
Suggested primer 2:GCGTAAAGGTCCAGCTCCTT