Insertion junction: CLIP2.062466_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062466
Chromosome:chromosome 12
Location:6313837
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g536850 (1 of 3) IPR000182//IPR011011//IPR016181 - GNAT domain // Zinc finger, FYVE/PHD-type // Acyl-CoA N-acyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTTCACTAGCCTCTGCACCTCCACCTGCCACCACCGCGCCCTCCACAT
Internal bar code:ACTATTGATGATACAAGGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:676
LEAP-Seq percent confirming:15.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGATCTGGTGGCTACGG
Suggested primer 2:ACTAACACTGACTGCCACCG