Insertion junction: CLIP2.062471_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062471
Chromosome:chromosome 16
Location:1976967
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g656433 TNP41,CSB59 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon); {"Probable transposon-derived protein of Chlamydomonas-Specific family B 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCCAGCCCCGTGGACTGTACGGTACTGTAACTTCGGGGACCGGTTGC
Internal bar code:GAACGATGGCCTCGATCTAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:873
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCGGCCTCAGACTGTGAA
Suggested primer 2:GGCGAAGAGGTAGCATTCGA