Insertion junction: CLIP2.062475_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062475
Chromosome:chromosome 2
Location:2354192
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g090750 (1 of 1) PF08574 - Protein of unknown function (DUF1762) (DUF1762) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGCAAGGAGCCGGGCCATTCCTCATGCCTCACGACATCCCTTTTCACG
Internal bar code:TGATAGCGTATGTTTCCTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2246
LEAP-Seq percent confirming:94.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGCCGGCTGGATACTAT
Suggested primer 2:GTGCAACTCGACCAGACTCA