Insertion junction: CLIP2.062482_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062482
Chromosome:chromosome 16
Location:276317
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g694250 (1 of 18) PF12937 - F-box-like (F-box-like) 5'UTR
Cre16.g694300 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTAATGCTATCACCGAAATAACCAAGTGACACGCGGCTACTTCTCTGC
Internal bar code:GTCATAGATAGTGGGTACGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2117
LEAP-Seq percent confirming:76.4706
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACGCATACACGCACATG
Suggested primer 2:ATTTGCAACGCGTGAGTGAC