Insertion junction: CLIP2.062485_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062485
Chromosome:chromosome 2
Location:7385405
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391949 (1 of 1) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED 3'UTR
Cre09.g391986 (1 of 1) 3.1.1.32 - Phospholipase A(1) / Phospholipase A1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGGCGGTTGGCGGCCGCTCCGGCCTGTTCCCACTTCACAGTGCAGTT
Internal bar code:GCGCGATGTCGTTTCAGGGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1579
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GAAACGGAACACACACCTGC
Suggested primer 2:TTTGGGTGGTGGAAGCTGTT