Insertion junction: CLIP2.062488_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062488
Chromosome:chromosome 17
Location:6792293
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g746847 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACGATGCTCATGCTGGAAGTTGCGTATGCGGTTAAAGTGGGCTTGACC
Internal bar code:ACGTCAGGGTGTTTTAAACTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3531
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACGCATGCCAGTAATGC
Suggested primer 2:ATCCGGTGCGTACTTTGTGT