Insertion junction: CLIP2.062495_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062495
Chromosome:chromosome 3
Location:4893905
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178650 MCM6 (1 of 1) K02542 - DNA replication licensing factor MCM6 (MCM6); Minichromosome maintenance protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCGCATACTCGCATTCATATCAATGCCTCTCGACATGGTTGCTGGTT
Internal bar code:TGAGGAAACGGGGGGTAGTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2046
LEAP-Seq percent confirming:97.9167
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAGCTGCTTGACTGTGTA
Suggested primer 2:CTAGAGCTCCGCCTAACGTG