Insertion junction: CLIP2.062505_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062505
Chromosome:chromosome 5
Location:2198190
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g237600 (1 of 1) PF09243 - Mitochondrial small ribosomal subunit Rsm22 (Rsm22) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCAGCCCATTGGCCCGTGACCGGGGAACACTTGTCCGATGCGAGGGA
Internal bar code:GGACGGGATGGATTGTAGCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1630
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAGGGCATACCATGTTGG
Suggested primer 2:CACGGGCTTCATAATTGCGG