Insertion junction: CLIP2.062507_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062507
Chromosome:chromosome 2
Location:6845561
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388430 (1 of 2) IPR000104//IPR001202 - Antifreeze protein, type I // WW domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATTGGGTCTCAGTCGGAAAGCGGCCGGGTGCACGTGCGTGCCGGAGC
Internal bar code:TGCATGCCCGGATGATATCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4029
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:109
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCTAACCCGGTGCATTGG
Suggested primer 2:CATCCGTTTGTGTGTGCGTT