Insertion junction: CLIP2.062507_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.062507
Chromosome:chromosome 2
Location:6845562
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388430 (1 of 2) IPR000104//IPR001202 - Antifreeze protein, type I // WW domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGTTTAACCTGTTTCGGTCTTCGAACGTACCTTCGTTGCAAGGTTCCC
Internal bar code:TGCATGCCCGGATGATATCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1562
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CATCCGTTTGTGTGTGCGTT
Suggested primer 2:AGTCTAACCCGGTGCATTGG