Insertion junction: CLIP2.062508_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062508
Chromosome:chromosome 3
Location:8010002
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201750 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTCGTGAAGGCACGCACCAGCTGTAAACGCAACAGAATGCCTTGAGCA
Internal bar code:TGTTGTCGTTGCTCACTTATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2041
LEAP-Seq percent confirming:91.1111
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACTCAAGCCGCAGACTG
Suggested primer 2:GATGGCTGCGTAGGGTACTC