Insertion junction: CLIP2.062510_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062510
Chromosome:chromosome 2
Location:8512735
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g141701 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCATGTACACCTTGGGACCGTGCCTTGGGACCCAGTCTTATTAATGCT
Internal bar code:AAATAATGTAATCTCGATCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:829
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGTGTGCGTGTTTCATTT
Suggested primer 2:TGGAGTGATGGAGGGGAGAG