Insertion junction: CLIP2.062513_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.062513
Chromosome:chromosome 1
Location:2415980
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g013850 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTCCGTCGATAGCTGCGTATTGTGCATTTCAGGTTTAAATGGAGCTAG
Internal bar code:CTATCCCTTCGCTAGAGTATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3917
LEAP-Seq percent confirming:89.2157
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACAAGCAACGGCATACA
Suggested primer 2:GCAGCTGCTCTTGCCTTTTT