Insertion junction: CLIP2.062514_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062514
Chromosome:chromosome 7
Location:4892238
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346500 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAACGGATGGTGAAGAGTTGATCTGGACAAGCTTTCTTGGCGCGAAGC
Internal bar code:TCAAATAAATGACGGCCACGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:990
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTCTTCCCTGCTTACA
Suggested primer 2:ATGGCATCTATCAGCGGTGG