Insertion junction: CLIP2.062523_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.062523
Chromosome:chromosome 8
Location:4173003
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383650 NUP85 Nucleoporin 85; (1 of 1) K14304 - nuclear pore complex protein Nup85 (NUP85) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTAATTACATAGTTTTGAAAGACGATACAACTCACTGGAGTGCAGAGC
Internal bar code:ATGAACGTGTTTCATTGTTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:128
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCGTGTTCGTGGTTTGTG
Suggested primer 2:GCATCCACTCCACCCATTCA