Insertion junction: CLIP2.062529_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062529
Chromosome:chromosome 9
Location:3168171
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394436 (1 of 1) PF03030 - Inorganic H+ pyrophosphatase (H_PPase) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGTCGGAAGGCCAAAATGGCCGCTCCGGACGCTCTTATCGCGGCCTTC
Internal bar code:ATGACGCACTATAACGGTGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:5605
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGGTTGTGTCGTAGGAAG
Suggested primer 2:AATGCGCCAAAGGGTTGTTC