Insertion junction: CLIP2.062531_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.062531
Chromosome:chromosome 6
Location:1990472
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g264900 HTB13 (1 of 27) K11252 - histone H2B (H2B); Histone H2B 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAATCGCACTGAATGACAATGCGCTATTTATTGCTGGAGTCGGCATCGG
Internal bar code:CTATGCGTGTGGCAGGCACTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3872
LEAP-Seq percent confirming:82.1782
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:101

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGAGTTTGAGGGAAGCAG
Suggested primer 2:TTACGTCCCGTGTCAAGGTG