Insertion junction: CLIP2.062537_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.062537
Chromosome:chromosome 12
Location:177279
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g484600 DMC6 Putative DNA methylase; (1 of 1) 2.1.1.204 - tRNA (cytosine(38)-C(5))-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCATCGAGTGCCGAATGGGGCGGTGACGACACCTACTTTCGAACGTCGT
Internal bar code:CACCCGGATTTGGTCTCACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1220
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCAGGTTTCAGGTTTGG
Suggested primer 2:ACCTGCTGCAGTACCTGTTC