Insertion junction: CLIP2.062540_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.062540
Chromosome:chromosome 6
Location:4669175
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278550 (1 of 3) PTHR12385//PTHR12385:SF44 - CTL TRANSPORTER // PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 3'UTR
Cre06.g278585 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCGGGCTGTTATCTTGGTCAGTGCTTGGCATCTGCTGACATGTAAGC
Internal bar code:CTCAAGGGGGGAGGCTCAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3963
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGTCCGACTATTAGCCC
Suggested primer 2:GCGATGCTGTATGCTGTGTG