Insertion junction: CLIP2.062541_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.062541
Chromosome:chromosome 4
Location:2234706
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g220300 (1 of 6) IPR001680//IPR015943//IPR017986//IPR020472 - WD40 repeat // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain // G-protein beta WD-40 repeat 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAATGCCGCAAGACCGTGACGTATGGGCATGACTAAAGCACTCGCGGCG
Internal bar code:GTCATTGGCTGCCAGAAAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:532
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTGGAGCTGGTGAGGAG
Suggested primer 2:GTTGCAGTGCAGGGAAAAGG